The gene set files described on this page are free to download and use as you wish. We have used them in gene set analysis for microarray analysis, GWAS analysis, and systems biology projects. These data and gene sets are for RESEARCH PURPOSES ONLY. They are speculative and should be used for exploratory research purposes only.                                                                                                               

If you find them useful or use part or all of them in subsequent papers, please cite:

Zhang, Y., De, S., Garner, J.R., Smith, K., Wang, S.A., Becker, K.G. Systematic analysis, comparison, and integration of disease based human genetic association data and mouse genetic phenotypic information. BMC Medical Genomics 2010 Jan 21;3:1.

De S, Zhang Y, Garner JR, Wang SA, Becker KG. Disease and phenotype gene set analysis of disease based gene expression in mouse and human. Physiol Genomics. 2010 Aug 3.

Human DISEASE/PHENOTYPE-Gene - (txt)
A file of Human Disease/Phenotype MeSH terms followed by associated genes.

Mouse Phenotype Gene sets derived from MGI-Mouse Genome Informatics Phenotypes Section

Mouse DISEASE/PHENOTYPE-Gene(mouse) - (txt)
A file of Mouse Disease-Phenotype Mammalian Phenotype (MP) terms followed by assigned mouse genes.

(before you use these gene sets in any analytical work such as microarray analysis  you HAVE TO KNOW AND UNDERSTAND this concept of directionality, please read this)

For further information please contact: Yonqing Zhang zhangyon@grc.nia.nih.gov  or Kevin G. Becker beckerk@grc.nia.nih.gov

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