National Institute on Aging, Gene Expression and Genomics Unit

National Institute on Aging
National Institutes of Health

Gene Expression and Genomics Unit
Research Resources Branch
Biomedical Research Center, Room 04B132
251 Bayview Blvd
Baltimore, MD 21224-6825
Phone: 410-558-8360
Fax: 410-558-8281
Email: beckerk@grc.nia.nih.gov

Supplementary Files

The tables found here are the supplementary tables to the following article:

Zhang, Y., De, S., Garner, J.R., Smith, K., Wang, S.A., Becker, K.G. Systematic analysis, comparison, and integration of disease based human genetic association data and mouse genetic phenotypic information. BMC Medical Genomics 2010

This paper describes the origins, construction and, applications of these mouse and human gene sets.

If you find this information useful to your work please cite this paper.

These data and gene sets are for RESEARCH PURPOSES ONLY. They are speculative and should be used for exploratory research purposes only.

For further information please contact: Yonqing Zhang [zhangyon@grc.nia.nih.gov] or Kevin G. Becker [beckerk@grc.nia.nih.gov]

Table S1

Human GENE-Disease/Phenotype - (txt)
A file of Human Genes followed by Disease Phenotype MeSH terms.

Human GENE-Disease/Phenotype Interactive - (html)
The same list as Table S1, but with direct searches back to GAD.

Table S2

Mouse GENE-Disease/Phenotype - (txt)
A file of Mouse Genes followed by Disease Phenotype Mammalian Phenotype (MP) terms.

Mouse GENE-Disease/Phenotype- (html)
The same list as Table S2, but with direct searches back to GAD.

Table S3

Human-Mouse Gene Overlap - (txt)
A list of 1105 genes that overlap between the Human gene-Disease Phenotype list (S1) and the Mouse Gene-Disease phenotype list (S2).

Table S4

Human DISEASE/PHENOTYPE-Gene
A file of Human Disease Phenotype MeSH terms followed by associated genes.

Human DISEASE/PHENOTYPE-Gene Interactive - (html)
A file of Human Disease Phenotype MeSH terms followed by associated genes, but with direct searches back to GAD.

Table S5

Mouse DISEASE/PHENOTYPE-Gene(mouse)
A file of Mouse Disease-Phenotype Mammalian Phenotype (MP) terms followed by assigned mouse genes.

Mouse DISEASE/PHENOTYPE-Gene(mouse) Interactive - (html)
A file of Mouse Disease-Phenotype Mammalian Phenotype (MP) terms followed by assigned mouse genes, but with direct searches back to MGI.

Table S6

Human Dendrogram Gene Sets - (txt)
A file of the GAD Human gene sets used in the dendrogram fig 2.

Table S7

Mouse Dendrogram Gene Sets - (txt)
A file of the Mouse gene sets used to build the mouse dendrogram fig 3.

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Last updated on: Friday September 17, 2010