- Thomas, J., and Nagaraja, R. Absorption Spectra of Algal and Chloroplast Suspensions: A Simple Method Using Conventional Spectrophotometers. Indian Journal of Biochemistry and Biophysics 16, 266-268, 1976.
- Haselkorn, R., Curtis, S.E., Fisher, R., Mazur, B.J., Mevarech, M., Rice, D., Nagaraja, R., Robinson, S.J., and,Tuli, R. Cloning and Physical Characterization of Anabaena Genes that Code for Important Functions in Heterocyst Differentiation: Nitrogenase, Glutamine Synthetase and RUBP Carboxylase: In: "Photosynthetic Prokaryotes; Cell Differentiation and Function." George C. Papageorgiou and Lester Packer, Editors. Elsevier Science Publishers., pp. 315-331, 1983.
- Yagil, E., Dolev, S., Oberto, J., Kislev, N., Nagaraja, R., and Weisberg, R.A. The Determinants of Site-Specific Recombination in the Lambdoid Coliphage HK022: An Evolutionary Change in Specificity. J. Mol. Biol. 207, 695-717, 1989.[Abs]
- Nagaraja, R. and Weisberg, R.A. Specificity Determinants in the Attachment Sites of Bacteriophages HK022 and Lambda. J. Bacteriology 172, 6540-6550, 1990.[Abs]
- Kremer, E.J., Pritchard, M., Nagaraja, R., Heitz, D., Lynch, M., Baker, E., Hyland, V.J., Little, R.D., Wada, M., Toniolo, D., Vincent, A., Rousseau, F., Schlessinger, D., Sutherland, G.R., and Richards, R.I. Isolation of Human DNA Sequence Which Spans the Fragile X. Am. J. Human Genetics 49, 656-661, 1991.[Abs]
- Schlessinger, D., Little, R.D., Freije, D., Abidi, F., Zucchi, I., Porta, G., Pilia, G., Nagaraja, R., Johnson, S.K., Yoon, J.Y., Srivastava, A., Kere, J. Palmieri, G., Ciccodicola, A., Montanaro, V., Romano, G., Casamassimi, A. and D'Urso, M. Yeast Artificial Chromosome-Based Genome Mapping: Some Lessons from Xq24-q28. Genomics 11, 783-793, 1991.[Abs]
- Nagaraja, R. Current Approaches to Long-Range Physical Mapping of the Human Genome: In Techniques for the Analysis of Complex Genomes. Rakesh Anand, ed. Academic Press, pp. 1-18, 1992.
- Kere, J., Nagaraja, R., Mumm, S., Ciccodicola, A., D'Urso, M. and Schlessinger, D. Mapping human chromosomes by walking with sequence-tagged sites from end-fragments of yeast artificial chromosome inserts. Genomics 14, 241-248, 1992.[Abs]
- Lengauer, C., Speicher, M.R., Popp, S., Jauch, A., Taniwaki, M., Nagaraja, R., Riethman, H.C., Donis-Keller, H., D'Urso, M., Schlessinger, D. and Cremer, T. Chromosomal bar codes constructed by fluorescence in situ hybridization with ALU-PCR products of multiple YAC clones. Human Molec. Genetics 2, 505-512, 1993.[Abs]
- Nagaraja, R., Kere, J., MacMillan, S., Masisi, M.W.J., Johnson, D., Halley, G., Molini, B.A., Wein, K., Trusgnich, M., Ebel, B., Brownstein, B.H., Railey, B. and Schlessinger, D. Characterization of four human YAC libraries for clone size, chimerism, and X chromosome sequence representation. Nucl. Acids Res. 22, 3406-3411, 1994.[Abs]
- Schiebel, K., Mertz, A., Winkelmann, M., Nagaraja, R., and Rappold, G. Localization of the adenine nucleotide translocase gene ANT2 to chromosome Xq24-q25 with tight linkage to DXS425. Genomics 24, 605-606, 1994.[Abs]
- Nagaraja, R. and Haselkorn, R. Protein HU from the cyanobacterium Anabaena..sp. Biochimie 76, 1082-1089, 1994.[Abs]
- Ried, K., Mertz, A., Nagaraja, R., Trusgnich, M., Riley, J.H., Anand, R., Lehrach, H., Page, D., Ellison, J.W. and Rappold, G. Characterization of a YAC contig spanning the pseudoautosomal region. Genomics 29, 787-792, 1995.[Abs]
- Trump, D., Pilia, G., Dixon, P.H., Wooding, C., Thakkar, R., Leigh, S.E.A., Nagaraja, R., Whyte, M.P., Schlessinger, D. and Thakker, R.V. Construction of a YAC contig and an STS map spanning 3.5 megabase pairs in Xp22.1. Human Genetics 97, 60-68, 1995.[Abs]
- Pilia, G., MacMillan, S., Nagaraja, R., Mumm, S., Weissenbach, J. and Schlessinger, D. YAC/STS map of 9 Mb of Xq26 at 100 kb resolution, localizing 6 ESTs, 5 genes, and 32 genetic markers. Genomics 34, 55-62, 1996.[Abs]
- Chen, C-N., Su, Y., Baybayan, P., Siruno, A., Nagaraja, R., Mazzarella, R., Schlessinger, D., and Chen, E. Ordered shotgun sequencing of a 135 kb Xq25 YAC containing ANT-2 and four possible genes, including three confirmed by EST matches. Nucl. Acids Res. 24, 4034-4041, 1996.[Abs]
- Gianfrancesco, F., Esposito, F., Ruini, L., Houlgatte, R., Nagaraja, R., D'Esposito, M., Auffray, C., Schlessinger, D., D'Urso, M., and Forabosco, A. Mapping of 59 EST gene markers in 31 intervals spanning the human X chromosome. Gene 187:179-184 1997.[Abs]
- Porta, G., MacMillan, S., Nagaraja, R., Mumm, S., Zucchi, I., Pilia, G., Miao, S., Featherstone, T., and Schlessinger, D. 4.5 Mb YAC/STS contig at 50 kb resolution, spanning Xq25 deletions in two patients with lymphoproliferative syndrome (LYP). Genome Research, 7, 27-36, 1997.[Abs]
- Nagaraja, R., MacMillan, S., Kere, J., Jones, C., Cox, S., Schmatz, M., Terrell, J., Shoemaker, M., Jermak, C., Hott, C., Masisi, M., Mumm, S., Srivastava, A., Pilia, G., Featherstone, T., Mazzarella, R., Kesterson, S., McCauley, B., Railey, B., Burough, F., Nowotny, V., States, D., Brownstein, B. and Schlessinger, D. YAC-based map of the X chromosome at 85 kb inter-STS resolution reveals extremes of recombination activity and GC content. Genome Research, 7, 210-222, 1997.[Abs]
- Esposito, T., Gianfrancesco, F., Ciccodicola, A., D'Esposito., M, Nagaraja, R., Mazzarella, R., D'Urso, M., Forabosco, A. Escape from X inactivation of two new genes associated with DXS6974E and DXS7020E. Genomics, 43, 183-190, 1997.[Abs]
- Mumm, S., Jermak, C., Waeltz, P., Schmatz, M., Terrell, J., McCauley, B., Shomaker, M., Srivastava, A., Kere. J., Nagaraja, R. 22 Mb integrated physical and genetic map based on YAC/STS content spanning the interval DXS1125-DXS95 in human Xq12-q21.31. Gene, 208, 147-156, 1998.[Abs]
- Seymour, A.B., Dash-Modi, A., O'Connell, J.R., Shaffer-Gordon, M., Mah, T.S., Stefko, S.T., Nagaraja, R., Brown, J., Kimura, A.E., Ferrell, R.E., Gorin, M.B. Linkage Analysis of X-linked Cone-Rod Dystrophy: Localization to Xp11.4 and Definition of a Locus Distinct from RP2 and RP3. Am. J. Human Genetics, 62, 122-129, 1998.[Abs]
- Nagaraja, R., Jermak, C., Trusgnich, C., Yoon, J.Y., MacMillan, S., McCauley, B., Brownstein, B and Schlessinger, D. YAC/STS map of 15 Mb of Xp21.3-p11.3, at 100 kb resolution, with refined comparisons of genetic distances and DMD structure. Gene, 215, 259-267, 1998. [Abs]
- Nagaraja, R. and Schlessinger, D. Impact and implications of yeast and human artificial chromosomes. Ann Med, 30, 286-191, 1998. [Abs]
- Nagaraja, R., MacMillan, S., Jones, C., Masisi, M., Pengue, G., Porta, G., Miao, S., Casamassimi, A., D'Urso, M., Brownstein, B and Schlessinger, D. Integrated YAC/STS physical and genetic map of 22 Mb of human Xp24. q26 at 56-kb inter-STS resolution. Genomics, 52, 247-266, 1998. [Abs]
- Stoddart, K.L, Jermak, C., Nagaraja, R., Schlessinger, D. and Bech-Hansen, T. Physical map covering a 1.5-Mb region in human Xp11.3 distal to DXS6849. Gene, 227, 111-116, 1999.[Abs]
- Srivastava, A.K., McMillan, S., Jermak., C., Shomaker, M., Copeland-Yates, S.A., Sossey-Alaoui, K., Mumm, S., Schlessinger, D. and Nagaraja, R. Integrated STS/YAC Physical, Genetic, and Transcript Map of Human Xq21.3 to q23/q24 (DXS1203-DXS1059). Genomics, 58, 188-201, 1999.[Abs]
- Gecz, J., Barnett, S., Liu, J., Hollway, G., Donnelly, A., Eyre, H., Eshkevari, H,S., Baltazar, R., Grunn, A., Nagaraja, R., Gilliam, C., Peltonen, L., Sutherland, G.R., Baron, M., and Mulley, J.C. Characterization of the human glutamate receptor subunit 3 gene (GRIA3), a candidate for bipolar disorder and nonspecific X-linked mental retardation. Genomics, 62, 356-368, 1999.[Abs]
- Tanaka, T. S., Jaradat, S.A., Lim, M.K., Kargul, G.J., Wang, X., Grahovac, M.J., Pantano, S.,
Sano, Y., Piao, Y., Nagaraja, R., Doi, H., Wood, W.H 3rd, Becker, K.G., and Ko, M.S.H. Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray. Proc. Natl. Acad. Sci. USA, 97, 9127-9132, 2000.[Abs]
- Kargul, G.J., Nagaraja, R., Shimada, T., Grahovac, M.J., Lim, M.K., Nakashima, H., Waeltz, P., Ma, P., Chen, E.Y., Schlessinger, D., and Ko, M.S.H. Eleven densely clustered genes, six of them novel, in 176 kb of mouse t-complex
DNA. Genome Res, 10, 916-923, 2000.[Abs]
- Schueler, M.G., Higgins, A.W., Nagaraja, R., Tentler, D., Dahl, N., Gustashaw, K., and Willard, H.F. Large-insert clone/STS contigs in Xq11-q12, spanning deletions in patients with androgen insensitivity and mental retardation. Genomics, 66, 104-109, 2000.[Abs]
- Cocchia, M., Kouprina, N., Kim, S.J., Larionov, V., Schlessinger, D., Nagaraja, R. Recovery and potential utility of YACs as circular YACs/BACs. Nucleic Acids Res, 28(17), E81, 2000. [Abs]
- Crisponi, L., Deiana, M., Loi, A., Chiappe, F., Uda, M., Amati, P., Bisceglia, L., Zelante, L., Nagaraja, R., Porcu, S., Ristaldi, M.S., Marzella, R., Rocchi, M., Nicolino, M., Lienhardt-Roussie, A., Nivelon, A., Verloes, A., Schlessinger, D., Gasparini, P., Bonneau, D., Cao, A., Pilia, G. The putative forkhead transcription factor FOXL2 is mutated in blepharophimosis/ptosis/epicanthus inversus syndrome. Nat Genet, 27(2), 159-66, 2001. [Abs]
- Mumm S., Herrera L., Waeltz P.W., Scardovi A., Nagaraja R., Esposito T., Schlessinger D., Rocchi M., Forabosco A. X/autosomal translocations in the Xq critical region associated with premature ovarian failure fall within and outside genes.
Genomics, 76(1-3), 30-36, 2001. [Abs]
- Galaviz-Hernandez, C., Stagg, C., de Ridder, G., Tanaka, T.S., Ko, M.S.H., Schlessinger, D., Nagaraja, R. Plac8 and Plac9, novel placental-enriched genes identified through microarray analysis. Gene, 1-9, 2003. [Abs]
- Sharov, A.A., Piao, Y., Matoba, R., Dudekula, D.B., Qian, Y., VanBuren, V., Falco, G., Martin, P.R., Stagg, C.A., Bassey, U.C., Wang, Y., Carter, M.G., Hamatani, T., Aiba, K., Akutsu, H., Sharova, L., Tanaka, T.S., Kimber, W.L., Yoshikawa, T., Jaradat, S.A., Pantano, S., Nagaraja, R., Boheler, K.R., Taub, D., Hodes, R.J., Longo, D.L., Schlessinger, D., Keller, J., Klotz, E., Kelsoe, G., Umezawa, A., Vescovi, A.L., Rossant, J., Kunath, T., Hogan, B.L., Curci, A., D'Urso, M., Kelso, J., Hide, W., Ko, M.S.H. Transcriptome analysis of mouse stem cells and early embryos. PLoS Biol. 1, 410-419, 2003. [Abs]
- Crisponi, L., Uda, M., Deiana, M., Loi, A., Nagaraja, R., Chiappe, F., Schlessinger, D., Cao, A., Pilia, G. FOXL2 inactivation by a translocation 171 kb away: analysis of 500 kb of chromosome 3 for candidate long-range regulatory sequences. Genomics, 83(5), 757-764, 2004. [Abs]
- Abe, K., Yuzuriha, M., Sugimoto, M., Ko, M.S., Brathwaite, M., Waeltz P., Nagaraja, R.
Gene content of the 750-kb critical region for mouse embryonic ectoderm lethal
tcl-w5. Mammalian Genome, 4, 265-276, 2004. [Abs]
- Scuteri, A., Sanna, S., Chen, W.M., Uda, M., Albai, G., Strait, J., Najjar, S., Nagaraja, R., Orru, M., Usala, G., Dei, M., Lai, S., Maschio, A., Busonero, F., Mulas, A., Ehret, G.B., Fink, A.A., Weder, A.B., Cooper, R.S., Galan, P., Chakravarti, A, Schlessinger, D., Cao, A., Lakatta, E., Abecasis, G.R. Genome-wide association scan shows genetic variants in the FTO gene are associated with obesity-related traits. PLoS Genet, 3(7), e115, 2007.
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